Omero¶

Classes¶

Omero image and metadata extraction

Functions¶

print_omero_object(omero_object[, indent])

Module Contents¶

class Omero.Omero(params: dict)¶

Omero image and metadata extraction

params¶

private_key_filename¶

credentials_filename¶

connected = False¶

__enter__() → Omero¶

__exit__(exc_type: type[BaseException], exc_value: BaseException, traceback: types.TracebackType)¶

init()¶

close()¶

_connect()¶

_disconnect()¶

_switch_user_group()¶

_get_project(project_id: int) → omero.gateway.ProjectWrapper¶

_get_dataset(dataset_id: int) → omero.gateway.DatasetWrapper¶

get_image_object(image_id: int) → omero.gateway.ImageWrapper¶

create_pixels_store(image_object: omero.gateway.ImageWrapper) → omero.gateway.ProxyObjectWrapper¶

get_annotation_image_ids() → dict¶

_get_dataset_images(dataset_id: int) → dict¶

get_image_annotation(image_id: int, target_labels: list) → tuple¶

_get_image_annotations(image_object: omero.gateway.ImageWrapper, annotation_keys: list) → dict¶

print_projects()¶

Omero.print_omero_object(omero_object: omero.gateway.BlitzObjectWrapper, indent: int = 0)¶