Omero
=====

.. py:module:: Omero


Classes
-------

.. autoapisummary::

   Omero.Omero


Functions
---------

.. autoapisummary::

   Omero.print_omero_object


Module Contents
---------------

.. py:class:: Omero(params: dict)

   Omero image and metadata extraction


   .. py:attribute:: params


   .. py:attribute:: private_key_filename


   .. py:attribute:: credentials_filename


   .. py:attribute:: connected
      :value: False



   .. py:method:: __enter__() -> Omero


   .. py:method:: __exit__(exc_type: type[BaseException], exc_value: BaseException, traceback: types.TracebackType)


   .. py:method:: init()


   .. py:method:: close()


   .. py:method:: _connect()


   .. py:method:: _disconnect()


   .. py:method:: _switch_user_group()


   .. py:method:: _get_project(project_id: int) -> omero.gateway.ProjectWrapper


   .. py:method:: _get_dataset(dataset_id: int) -> omero.gateway.DatasetWrapper


   .. py:method:: get_image_object(image_id: int) -> omero.gateway.ImageWrapper


   .. py:method:: create_pixels_store(image_object: omero.gateway.ImageWrapper) -> omero.gateway.ProxyObjectWrapper


   .. py:method:: get_annotation_image_ids() -> dict


   .. py:method:: _get_dataset_images(dataset_id: int) -> dict


   .. py:method:: get_image_annotation(image_id: int, target_labels: list) -> tuple


   .. py:method:: _get_image_annotations(image_object: omero.gateway.ImageWrapper, annotation_keys: list) -> dict


   .. py:method:: print_projects()


.. py:function:: print_omero_object(omero_object: omero.gateway.BlitzObjectWrapper, indent: int = 0)