OmeroSource

Module Contents

Classes

OmeroSource

Omero image source

class OmeroSource.OmeroSource(omero: OmeSliCC.Omero, image_id: int, source_pixel_size: list = None, target_pixel_size: list = None, source_info_required: bool = False)

Bases: OmeSliCC.OmeSource.OmeSource

Omero image source

omero: OmeSliCC.Omero

Omero instance

image_id: int

Omero image id

image_object: OmeroSource.omero

Omero image object

pixels_store: OmeroSource.omero

Raw pixels store object

pixels_store_pyramid_order: list

Raw pixels store pyramid sizes order (pixel store level order not guaranteed)

_find_metadata()

create_xml_metadata(output_filename: str, combine_rgb: bool = True, pyramid_sizes_add: list = None) → str

get_thumbnail(target_size: tuple, precise: bool = False) → numpy.ndarray

_asarray_level(level: int, **slicing) → numpy.ndarray

close()